Assignment:
Question 1. What is the 1000 genomes project?
Question 2. What are the super populations and sub-populations that contributed genomic DNA to the 1000 genomes project?
Question 3. Why are the ACE2 and TMPRSS2 human genes of interest when it comes to understanding the severity of covid infection?
Question 4. Make labelled figures for, or describe (or do both) the headers of a typical FASTQ, SAM/BAM and VCF file, include column heading descriptions where appropriate - highlight what they have in common and what is unique to each file type. The goal here is to be able to recognize when you have successfully created / downloaded a VCF file and understand what it looks like so that we can import it into Rstudio
Question 5. what does ACE stand for?
Question 6. On which chromosome do we find the human ACE2 gene?
Question 7. How many different orthologous genes of ACE2 have been sequenced and name at least 1 vertebrate and 1 invertebrate in which it is found.
Question 8. What does BASH stand for?
Question 9. What is a directory? Do directories have extensions like .exe or .txt?
Question 10. using some of the commands you are learning about, briefly describe what the man command does (make sure you understand what the command q does beforehand)