How can we run DOCK 6 by using cygwin

Question

How can we run DOCK 6 by using cygwin?

Answer 1

i). Install the required package like bison, perl and so on.

ii). Configure gnu file using . or configure gnu.

iii). Download accessory programs, like dms, chimera, sphgen.

iv). Make structure and form spheres and then built the grid for ligand.

v). Dock molecule, through selecting the rigid dcking or flexible docking.

vi). Provide the input file for the chosen docking and acquire the output.